Engineers at the University of California have developed a new data structure and compression technique that enables the field of pangenomics to handle unprecedented scales of genetic information. The ...

Abstract: The outcome of a Multiple Sequence Alignment (MSA) can be compactly represented by means of Elastic-Degenerate Strings (ED-strings) by collapsing conserved fragments into standard linear ...

Abstract: Sequence alignment is a crucial tool in biological research. Alignment quality is typically assessed using scores, but these do not guarantee optimality. Estimating the optimal alignment ...

US Secretary of State Marco Rubio has clarified that Washington’s renewed partnership with Pakistan will not come at the cost of its strong ties with India. Addressing media questions post-Operation ...

In this tutorial, we demonstrate how to build an advanced yet accessible Bioinformatics AI Agent using Biopython and popular Python libraries, designed to run seamlessly in Google Colab. By combining ...

Our easy-to-use web-based converter instantly converts your aligned FASTA sequences into PHYLIP format. The PHYLIP format is essential for many phylogenetic analysis tools, such as PHYLIP, RAxML, and ...

Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. Non-Commercial (NC): Only non-commercial uses of the work are permitted. AlphaFold has ...

Kevin K. Yang, Sarah Alamdari, Alex J. Lee, Kaeli Kaymak-Loveless, Samir Char, Garyk Brixi, Carles Domingo-Enrich, Chentong Wang, Suyue Lyu, Nicolo Fusi, Philip Rosenfield, Neil Tenenholtz, Ava P.

WitChi is an analysis and pruning tool designed to evaluate and reduce compositional bias in multiple sequence alignments (MSAs). It utilizes statistical methods, permutation tests, and parallel ...

1 School of Computer Science, University College Dublin, Dublin, Ireland 2 Department of Computer Science, College of Science, Northern Border University, Arar, Saudi Arabia DeepPredict is a freely ...